TAP SET in Funaria hygrometrica (Transcriptome)

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Funaria

Protein source: Szövényi et al. (2010) Mol Biol Evol 28:803


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SET
PHD
zf-C2H2
TCR
Myb_DNA-binding
CXC

(Domain names are clickable)



List of proteins (108)

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m240lflr_TR10485_c0_g1_i1_8_rc
m240lflr_TR12579_c0_g1_i2_3
m240lflr_TR13010_c0_g1_i2_4
m240lflr_TR13010_c0_g1_i3_2
m240lflr_TR13010_c0_g1_i4_3
m240lflr_TR13010_c0_g1_i5_3
m240lflr_TR13054_c0_g1_i1_6_rc
m240lflr_TR13054_c0_g1_i3_5_rc
m240lflr_TR13054_c0_g1_i4_5_rc
m240lflr_TR13674_c0_g1_i1_2
m240lflr_TR13674_c0_g1_i2_2
m240lflr_TR13869_c0_g2_i1_3_rc
m240lflr_TR13869_c0_g3_i1_3_rc
m240lflr_TR15264_c0_g1_i1_1
m240lflr_TR15264_c0_g2_i1_1
m240lflr_TR16084_c1_g1_i1_3
m240lflr_TR16084_c1_g1_i2_3
m240lflr_TR18617_c0_g1_i1_1_rc
m240lflr_TR19260_c0_g1_i1_6_rc
m240lflr_TR19260_c0_g2_i1_5_rc
m240lflr_TR19260_c0_g3_i1_7_rc
m240lflr_TR19785_c0_g1_i1_3_rc
m240lflr_TR19785_c0_g1_i2_4_rc
m240lflr_TR19785_c0_g1_i4_4_rc
m240lflr_TR20389_c0_g1_i1_2
m240lflr_TR209_c0_g1_i1_4_rc
m240lflr_TR209_c0_g2_i1_4_rc
m240lflr_TR22019_c0_g1_i2_3
m240lflr_TR22019_c0_g1_i4_4
m240lflr_TR221_c0_g1_i1_2
m240lflr_TR221_c0_g2_i1_1
m240lflr_TR221_c1_g1_i1_2
m240lflr_TR22768_c0_g1_i12_18_rc
m240lflr_TR22768_c0_g1_i13_19_rc
m240lflr_TR22768_c0_g1_i15_18_rc
m240lflr_TR22768_c0_g1_i17_17_rc
m240lflr_TR22768_c0_g1_i18_18_rc
m240lflr_TR22768_c0_g1_i1_18_rc
m240lflr_TR22768_c0_g1_i2_17_rc
m240lflr_TR22768_c0_g1_i3_19_rc
m240lflr_TR22768_c0_g1_i5_19_rc
m240lflr_TR22768_c0_g1_i6_18_rc
m240lflr_TR22768_c0_g1_i7_17_rc
m240lflr_TR22768_c0_g1_i8_18_rc
m240lflr_TR25346_c0_g1_i1_1
m240lflr_TR25485_c0_g1_i1_5
m240lflr_TR26569_c0_g1_i1_1
m240lflr_TR27166_c0_g1_i1_1
m240lflr_TR29529_c0_g1_i10_16_rc
m240lflr_TR29529_c0_g1_i11_14_rc
m240lflr_TR29529_c0_g1_i12_15_rc
m240lflr_TR29529_c0_g1_i13_13_rc
m240lflr_TR29529_c0_g1_i14_14_rc
m240lflr_TR29529_c0_g1_i15_15_rc
m240lflr_TR29529_c0_g1_i17_15_rc
m240lflr_TR29529_c0_g1_i18_16_rc
m240lflr_TR29529_c0_g1_i1_14_rc
m240lflr_TR29529_c0_g1_i2_16_rc
m240lflr_TR29529_c0_g1_i3_15_rc
m240lflr_TR29529_c0_g1_i4_16_rc
m240lflr_TR29529_c0_g1_i5_16_rc
m240lflr_TR29529_c0_g1_i6_16_rc
m240lflr_TR29529_c0_g1_i7_17_rc
m240lflr_TR29529_c0_g1_i9_4_rc
m240lflr_TR30255_c0_g1_i1_1
m240lflr_TR30255_c0_g1_i2_1
m240lflr_TR30298_c0_g1_i1_1
m240lflr_TR31602_c0_g1_i1_4_rc
m240lflr_TR31602_c0_g2_i1_2_rc
m240lflr_TR31634_c0_g2_i1_1
m240lflr_TR31634_c0_g2_i2_1
m240lflr_TR31634_c0_g2_i3_1
m240lflr_TR32770_c0_g1_i1_2_rc
m240lflr_TR34514_c0_g2_i6_2
m240lflr_TR35268_c0_g1_i1_1
m240lflr_TR35268_c0_g1_i2_1
m240lflr_TR35268_c0_g1_i3_1
m240lflr_TR35268_c0_g1_i4_1
m240lflr_TR36012_c0_g1_i1_2
m240lflr_TR36012_c0_g1_i2_2
m240lflr_TR36012_c0_g1_i3_2
m240lflr_TR38954_c0_g1_i1_2
m240lflr_TR38954_c0_g2_i1_1
m240lflr_TR38954_c0_g3_i1_1
m240lflr_TR39224_c0_g1_i1_2
m240lflr_TR42504_c0_g1_i1_2_rc
m240lflr_TR42504_c0_g2_i1_2_rc
m240lflr_TR43487_c1_g1_i1_1
m240lflr_TR43693_c0_g1_i1_6_rc
m240lflr_TR43693_c0_g1_i2_7_rc
m240lflr_TR43693_c0_g1_i3_6_rc
m240lflr_TR43693_c0_g1_i4_7_rc
m240lflr_TR46561_c0_g1_i1_15_rc
m240lflr_TR46561_c0_g2_i1_17_rc
m240lflr_TR47690_c0_g1_i1_4_rc
m240lflr_TR47690_c0_g2_i1_2_rc
m240lflr_TR50185_c0_g1_i1_2
m240lflr_TR50185_c0_g1_i2_2
m240lflr_TR50228_c0_g2_i2_5_rc
m240lflr_TR50228_c0_g2_i3_6_rc
m240lflr_TR5238_c0_g1_i1_2
m240lflr_TR8244_c0_g1_i1_1
m240lflr_TR8336_c0_g3_i1_3_rc
m240lflr_TR939_c0_g1_i1_3_rc
m240lflr_TR939_c0_g1_i3_2_rc
m240lflr_TR939_c0_g1_i4_24_rc
m240lflr_TR939_c0_g1_i5_2_rc
m240lflr_TR939_c0_g1_i6_22_rc
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum